p16 a biomarker of aging and tolerance for cancer therapy
Introduction
The world’s population is aging and while in the 19th-century human life expectancy increased from 20 to 40 years, from the 19th century to the 20th-century life expectancy doubled to 80 years and continues to increase (1). Globally, the population over age 65 years is the fastest-growing age group. The US population continues to age and by 2050, the number of Americans aged 65 and older is projected to be 88.5 million, which is more than double the population of 40.2 million in 2010 (2). This aging of the population is associated with an increased cancer incidence which rises dramatically with age and suggests that between 2010 and 2030, there will be a 67% increase in cancer incidence for patients age 65 years or older (3). Moreover, patients who are 65 years and older have an 11-fold risk of developing cancer (4). Further, increasing age portends a higher risk of multi-morbidity and frailty, complicating treatment choices for aging cancer patients and creating an urgent need to better understand the impact of aging in decision-making for cancer treatments.
Aging is a heterogeneous process and chronologic age is a poor reflector of molecular age, health risk, and life span. For clinical decision making in cancer, life expectancy is a key consideration, and patients of similar chronological ages but with major differences in life expectancy are likely to be offered different treatment options. High-quality tools are available to calculate life expectancy (5), and for older cancer patients specifically, clinical and geriatric assessment data have been used to develop models to predict surgical outcomes and chemotherapy toxicity (6,7). Clinical judgment is usually accurate for assessing cancer treatment tolerance in extremely healthy or very frail patients but can be inaccurate for a large segment of middle-aged and older patients with moderate comorbidity or loss of function. Better tools are needed to facilitate treatment decisions in patients who may self-rate their health as good but who may actually have substantial functional and other deficits (8). Another concern is undertreatment, which frequently happens when using chronologic age alone to make cancer treatment decisions. For example, older adults with breast cancer are less likely to be offered chemotherapy (9-11) with 47% of women over 65 receiving chemotherapy compared to 81% of women aged 20 to 64 years (12). Even healthier older patients, with no or very few co-morbid illnesses (diabetes, kidney disease, or heart disease) are less likely to receive appropriate treatment (12). The National Cancer Institute has voiced significant concern over these treatment discrepancies, highlighting women over 65 years with early breast cancer as a “group at high risk for not receiving appropriate treatment” (12). Given that the average lifespan for women in the US is 81 years, many older women with potentially curable breast cancer can significantly benefit from adjuvant chemotherapy. There is a major need for accurate, biologically plausible, and clinically accessible biomarkers that would augment current clinical assessments used for treatment decision making in all cancer patients. The ideal biomarker would identify patients most likely to experience increased toxicities associated with accelerated aging or other deficits, thereby enabling preventive strategies that might minimize long term morbidity.
While age-related diseases have diverse phenotypes, there is increasing recognition of common biological underpinnings with cellular senescence as the nexus-linking subcellular changes due to genetic factors and environmental insults with lifespan and the eventual decline in health and development of frailty (13). Senescence is a state of permanent cellular growth arrest (replicative senescence); because senescent cells cannot undergo cell division, they cannot contribute to tissue repair and homeostasis. In addition, senescent cells secrete myriad pro-inflammatory cytokines, contributing to inflammation and impaired organ regeneration. Accumulation of senescent cells broadly contributes to tissue aging across organ systems and suggests that biomarkers of senescence could be used to identify a patient’s “molecular age”. Molecular age, in turn, could be used for better risk stratification to maximize treatment efficacy and minimize adverse events. This review focuses on p16, a crucial biomarker of cell senescence and molecular aging, the methodology of p16 measurement in humans, and the utility of p16 expression in guiding cancer treatments.
Biomarkers of aging
Studies over the last several years have identified molecular biomarkers that may serve as markers of the aging process. The American Federation of Aging Research (AFAR) has stated that a true biomarker of aging is one “that predicts a person’s physiological, cognitive, and physical function in an age-related way, must be testable and not harmful to test subjects, and should work in laboratory animals as well as humans” (https://www.afar.org/docs/AFAR_BIOMARKERS_OF_AGING_2016.pdf). Candidates for biomarkers of aging have been reviewed elsewhere (14-16). They include inflammatory markers characterized by a pervasive low-grade and chronic inflammation (‘inflammaging’) such as C-reactive protein (CRP), interleukins (most prominently IL-6) and tumor necrosis factors (TNF-α) (17), telomere length (short telomeres trigger DNA damage checkpoints that cause mitotic arrest and cell senescence) (18), DNA methylation (19), measurement of maximal oxygen consumption (vO2max) (20), and sarcopenia (21). These biomarkers change throughout the lifespan, correlate with an increase in frailty and mortality, and can, in theory, be used to quantify the aging process. Leukocyte telomere length (LTL) decreases with increasing chronologic age and with activities known to accelerate aging such as cigarette smoking (22). Serum levels of D-Dimer also increase with age and are associated with clinical frailty (23). Likewise, the expression of IL-6 increases with aging and correlates with age-associated morbidity and mortality (24). While these biomarkers unequivocally change with age, none is well-suited for individual risk prediction due to several important technical and biological limitations. First, some of these markers (e.g., LTL) are challenging to measure and exhibit a very small dynamic range (e.g., <40%) across the human lifespan, with substantial variation among individuals at baseline/birth (25,26). Although LTL can be used to estimate aging in individuals with genetically short telomeres (dyskeratosis congenita and some idiopathic pulmonary fibrosis patients), it does not have clinical accuracy for predicting biological age in the general population (24,27,28). Most aging-associated cytokines (e.g., IL-6) are highly labile influenced by inflammation, with transient high expression observed in adults with acute infections and other inflammatory conditions. Signatures of cytokine panels, known as senescence-associated secretory phenotype (SASPs), are notoriously tissue-specific and require immediate sample processing to accurately capture in vivo levels. Recently, DNA methylation has been suggested as a marker of biological age. Although intriguing, all studies of DNA methylation have been powered to predict different endpoints, such as best fit with chronological age or mortality, but so far none has been shown to have clinical utility in any disease (29,30).
The expression of p16 meets the AFAR criteria for an effective biomarker of aging. It dramatically increases with age and encodes for a protein that blocks cyclin-dependent kinase which promotes cellular senescence and permanent cell-cycle arrest (31). In addition to meeting the AFAR definition of an aging biomarker, measurement of p16 expression is a quantitative measurement of senescence—a central mechanism by which environmental, genetic, and lifestyle damage affects the aging of an individual and leads to functional decline. In addition, and especially for patients receiving cancer chemotherapy, there is excellent evidence in children (32) and emerging evidence in adults (33,34) that such treatment accelerates both physiologic and biologic aging. What is especially compelling about p16 expression as a biomarker of aging is its dramatic and dynamic range among patients of similar chronologic age. Figure 1 shows the wide range in p16 expression that can vary by several logs (log2) for cancer or heart disease patients of similar chronologic age. Similar changes have been shown in normal controls (31).
Aging and senescence
The depletion of senescent cells in experimental animal models demonstrates the critical role of senescence in age-related declines in physical function as well as the initiation and progression of common, chronic diseases (Figure 2). Transplant of senescent cells from old animals into young animals induces similar age-related loss of function and shortened lifespan (35). Senolytic therapies (pharmacologic vs. transgenic depletion of senescent cells), in turn, restore function and increase lifespan in both normally aged mice and mice aged by transplanting senescent cells into young donor mice (35-37). Tissue-level analysis in animal models demonstrates that senescence occurs throughout the organism (37,38). Moreover, senescent cells are highly metabolically active and are capable of inducing senescence in bystander cells at both local and distant sites (35,39). Cumulatively, this evidence suggests that senescence has systemic effects that can be measured and may be regulated at the organismal level. Consequently, the role of senescence in human disease is an area of strong interest and active inquiry.
p16 and senescence
In humans, p16 is found on chromosome 9p21 in close proximity to two other tumor suppressor genes, p15 and ARF (Figure 3) (40). p16 and ARF genes are alternatively spliced from the same locus, but because their first exons are distinct, the resulting protein sequences are distinct. Signals that eventually lead to senescence upregulate p16 and p15 cell cycle genes. P16 is a cyclin-dependent kinase inhibitor that acts on CDK4/6 kinases to prevent phosphorylation of retinoblastoma (Rb) family proteins and promotes G1 cell cycle arrest, leading to senescence. ARF promotes senescence through the p53 tumor suppression pathway. Expression of p16 is not detected in young cells but is potently activated by stress factors that promote cellular senescence (40-43). This results in a permanent arrest of cellular growth and maintenance of the p16 transcript which is required for maintenance of the senescent phenotype. Nearly all of the compelling animal data cited above, including evidence for a causal role for senescence in age-related diseases, has been generated using experimental models in which senescence is defined by expression of the p16 biomarker (35-37,44-49). p16 expression is highly dynamic, increasing exponentially with age in all mammalian species tested to date (38,50,51). Thus, unlike the other biomarkers of aging described above, p16 plays a direct and essential role in the initiation and maintenance of senescence. Much of the early work pertaining to p16 was done in the laboratory of Dr. Ned Sharpless at the University of North Carolina (31,38,40,52-54). This work prompted the creation of p16-based senescence animal models (36,55-57) which have transformed our understanding of senescence as a critical aging mechanism and led to current research exploring the age-accelerating effects of medical procedures and therapeutics.
In humans, ample unbiased genome-wide association study data implicate p16 as a critical determinant of human aging and age-related conditions (52,58-61). Clinical studies addressing the significance of senescence in human frailty and aging are just beginning. A recent study demonstrated that p16 expression in biopsied intramuscular fat independently correlates with lower muscle strength and worse walking performance (15,62), and small exploratory studies of senolytic therapies are being planned (63,64). Consequently, the role of senescence in human disease is an area of strong interest and active inquiry with therapeutic implications for a rapidly aging society.
Measurement of the p16 biomarker
In order to study senescence in humans where multi-tissue analysis is not possible, the Sharpless lab developed an assay to measure p16 expression in an easily obtained and clinically relevant tissue—peripheral blood (31). Given the systemic nature of senescence, they postulated that measurement of senescence in the blood may serve as a surrogate for the organismal senescent load. First, they discovered that expression of p16 in peripheral blood mononuclear cells (PBMCs), frequently used to measure expression for other clinical diagnostics, is too low to allow reproducible detection. Therefore, they identified a blood subtype that expresses the majority of p16, T-cells—and used isolated T-cells to measure p16 expression. Second, they observed that the measurement of p16 mRNA is more reliable than its derived protein. p16 mRNA and its protein are both upregulated in senescent cells; however, p16 mRNA, with an unusually long half-life of greater than 24 hours (65-68), is significantly more stable than protein [half-life 30 minutes to 3.5 hours (69)]. Given this unparalleled stability, an RT-PCR assay measuring p16 expression can be used to measure senescence with analytical precision and reproducibility superior to other RT-PCR diagnostics.
Using this assay to measure p16 mRNA in T-cells, Sharpless and colleagues found that p16 was highly dynamic, doubling about every 8 years. As expected, expression of p16 was not detected in young adult donors (under 20 years of age). Subsequent studies demonstrated that expression of p16 in human T-cells is influenced by a variety of age-promoting stimuli, including cigarette smoking, physical inactivity (31), cytotoxic chemotherapy administration (34), chronic HIV infection (70), and bone marrow transplantation (33). Collectively, these data show that a blood-based diagnostic test of p16 gene expression is a practical biomarker of molecular age, with expression in T-cells acting as a faithful reporter of senescence load.
More recently, Mitin and collaborators (Sapere Bio, Research Triangle Park, NC, USA) have continued to build on the research version of the p16 assay to develop a reproducible, sensitive and analytically validated version that can be easily used in a clinical setting. Investigators added an extensive panel of positive and negative controls isolated from human subjects, expanded the panel of housekeeping genes used to normalize p16 expression, and established quality control parameters to monitor every step of the assay from sample collection through p16 RT-PCR measurement. Implementation of these steps allowed measurement of p16 mRNA with a coefficient of variation <4% (Mitin et al., unpublished data).
Traditionally, T-cells were isolated within 6 to 8 hours of venipuncture to obtain the desired reproducibility/precision of p16 measurement. If not isolated within 8 hours, p16 expression levels drop below detection, especially in younger patients. The need to isolate T-cells the same day creates a major research challenge in clinical settings, especially in oncology practice where most patients are seen in community clinic settings. To address this challenge, the Mitin lab has developed a whole blood stabilization solution which, when added to the blood collection tube can preserve T-cells and corresponding p16 expression levels for up to 48 hours. This improvement allows for blood samples to be collected in the clinic and sent to a central lab for processing without compromising sample integrity and opens the way for investigators to further explore the role of senescence biomarkers in a wide variety of research settings with analytically and clinically validated methods.
Clinical utility of p16 measurement in cancer
To-date p16-based molecular age in clinical studies has been studied in two major ways. Because p16 expression varies greatly among patients of similar chronologic age, baseline p16 measures have been correlated with individual patient outcomes, illuminating otherwise unseen risk/resilience prior to treatment. Second, measuring changes in p16 expression pre- and post-treatment have revealed differences in the degree to which chemotherapies and high-dose chemotherapy and stem cell transplants are age-accelerating, potentially depleting physiologic reserve and increasing the risk of frailty and more rapid health decline in survivorship. Although impressive changes in p16 expression have been noted with chemotherapy (discussed below), the long-term implications of these changes on the development of chronic disease and life expectancy remain uncertain. Only long-term follow-up of patients in current studies will answer these questions. p16 measurement at baseline and after treatment may be used in the future to optimize treatment decisions for individual patients, where invisible molecular aging confers risk. Below, we summarize current studies demonstrating the age-accelerating effects of chemotherapy and the relationship of baseline p16 and the risk of specific chemotherapy-induced toxicities in hematologic and solid tumor malignancies. This work suggests that the knowledge of a patient’s molecular age and understanding its clinical implications prior to treatment has the potential to improve treatment decisions.
p16 in hematologic malignancy
Acute myelogenous leukemia, non-Hodgkin’s lymphoma, and multiple myeloma are malignancies that are age-dependent, with the majority of patients diagnosed after age 65 (71) (https://seer.cancer.gov/csr/1975_2016/). Multiple myeloma is primarily treated with systemically administered medications including “novel agents” that are not designed to function via DNA-damaging mechanisms. However, high-dose chemotherapy (usually melphalan) with autologous stem cell transplantation remains a key standard of care for managing myeloma in some patients. Melphalan, an alkylator, functions by causing DNA crosslinking and mutagenesis (72). Consequently, investigations surrounding both natural aging and therapy-induced accelerated aging are highly relevant in multiple myeloma, including biomarkers of aging such as p16. Investigators at the Ohio State University compared peripheral blood T-cell p16 expression levels in normal controls (n=17) and patients with both newly diagnosed (treatment-naïve) and relapsed or treatment-refractory (n=11 and 24 respectively), with ages ranging from 35–82 across the entire cohort. After controlling for age, the authors observed greater p16 expression in patients with relapsed/refractory myeloma vs. normal controls but p16 was not significantly elevated in newly diagnosed myeloma patients compared to controls. The study team then investigated the impact of specific therapies. “Immunomodulatory agents”, primarily lenalidomide, did not appear to impact p16 levels. However, when p16 expression was measured in a small number of patients both before and after high-dose chemotherapy with autologous stem cell transplant, an increase in p16 expression was observed post-transplant that ranged from 2.25- to 32.2-fold. This magnitude of p16 increase was correlated with 33.7 years of natural aging (based on approximate “conversions” described elsewhere (31). The authors concluded that high-dose chemotherapy and stem cell transplant physiologically age a patient, whereas novel agents do not seem to do so (73).
A related analysis by members of our group examined patients undergoing autologous or allogeneic stem cell transplant for various hematologic malignancies (33). Of 63 patients, 15 (24%) had myeloma, 14 of whom were treated with high-dose chemotherapy and autologous transplantation. Among these patients, no associations were found between pre-transplant chemotherapy (i.e., cytotoxic vs. novel agents) and pre-transplant p16 expression, but that population was relatively small and heterogeneous. In this same study, 14 patients had lymphoma (10 treated with autologous stem cells and 4 with allogeneic cells) and 19 had acute leukemia (all treated with allogeneic cells). Patients receiving autologous transplants had a 3.1-fold increase in p16 expression pre-to post-transplant that corresponded to 28 years of accelerated aging (P=0.002), compared to those treated with allotransplant (1.9-fold-increase or 16 years of accelerated aging, P=0.0004). For all patients who received autologous transplants, no baseline characteristics were associated with pre-transplant p16 expression. However, for patients who received allogeneic transplants, more chemotherapy cycles before transplant, a history of prior autologous transplantation, or a history of alkylating agent exposure, were all significantly associated with higher pre-transplant p16 expression (P<0.01 for each). These pre- to post-transplant changes in p16 are among the highest observed in the literature to date, as compared to the impact of other noxious immune stimuli such as non-transplant cytotoxic chemotherapy, HIV infection, or tobacco use. Further exploration of gene expression in T-cells in this study by gene set enrichment analysis (GSEA) suggested that transplant induced not only p16 expression but also a broader milieu of changes associated with immune aging manifested as a shift from central memory and naïve cells to effector cells and regulatory T-cells, changes that have been associated with aging in other studies (74).
Taken together, these limited data suggest that the development of multiple myeloma itself and treatment with non-DNA-damaging novel agents may not necessarily induce p16 expression and accelerated aging, while treatment with DNA-damaging agents such as high-dose melphalan with autologous stem cell transplantation may induce aging. In patients with acute leukemia and lymphoma treated with an allogeneic transplant, more cycles of chemotherapy and alkylating agents increased p16 prior to transplant as compared to controls. Further studies of aging, p16 expression, hematologic malignancy are ongoing by our group and others.
p16 and cancer treatment in children, adolescents, and young adults
Improved care for childhood, adolescent, and young adult cancers has led to increased survival with more than an estimated 500,000 survivors (75). However, due to cancer and its treatment, many of these survivors’ experience accelerated aging as evidenced by a disproportionate loss of exercise capacity (76), cognitive decline (77), and early development of chronic medical morbidities (32) leading to discordance between chronological and molecular ages. As has been observed in adults, limited data among childhood cancer survivors suggest that cancer treatment increases levels of p16 expression to induce senescence. A single study of ten patients treated with cranial radiation for childhood acute lymphoblastic leukemia (1 to 10 years old at diagnosis) compared p16 mRNA expression in paired skin biopsies from the scalp and buttock (78). The authors observed a nearly 6-fold increase in p16 expression in the radiated scalp samples as compared to the buttock biopsies, suggesting increased senescence in response to ionizing radiation exposure. The survivors were on average 12 years post therapy, suggesting that the increase in senescence persists over time.
Further research is needed to better define p16 expression in childhood, adolescent, and young adult cancer survivors and to understand the role that cellular senescence plays in the early aging phenomenon seen in this population. For example, is the aging trajectory similar in childhood cancer survivors and naturally aging adults after the initial chemotherapy-induced age acceleration? Or, will the damage accumulated during chemotherapy continue to impact their aging trajectory and continue to accelerate aging? How long does it take for the chemotherapy-induced p16 boost to present itself as a clinical measurement of health decline and frailty? Can a post-chemotherapy rehabilitation program guided by p16-based risk stratification help slowdown progression to clinical frailty to extend a healthy lifespan in the survivors? Can p16 expression be used as a proximal biomarker to assess the efficacy of such rehabilitation interventions? Ongoing work of our group is currently attempting to answer these questions and help improve clinical decision-making for patients at risk for the potential development of treatment-related physiologic impairment and morbidities, and that may guide the frequency and type of monitoring during survivorship.
p16 in solid tumors
Higher baseline p16 expression prior to chemotherapy treatment in breast cancer patients has been shown to be associated with greater treatment-related fatigue (57) and a higher risk of chemotherapy-induced peripheral neuropathy (manuscript in preparation). In a study of women with breast cancer, changes in p16 in patients receiving adjuvant and neoadjuvant chemotherapy has been explored with initial findings showing a rapid, marked, and sustained increase from pre- to post-treatment, especially in patients receiving anthracycline-based chemotherapy (34). In that study, p16 measurement in peripheral blood T-cells was performed at four time points in a prospectively followed cohort of 33 women with stage I–III breast cancer. It was observed that p16 expression increased shortly after the start of chemotherapy and remained elevated 12 months later, with a 75% absolute increase in p16 expression that was equivalent to 14.7 years of chronologic aging. Expression of two senescence-associated cytokines, VEGFA and MCP1, was also significantly increased during chemotherapy, but LTL and IL-6 were not. In a cross-sectional cohort of 176 breast cancer survivors who were followed for a median of 3.4 years, the 39% of women treated with chemotherapy had an increase in p16 expression comparable to 10.4 years of chronological aging (34). A more recent study in a different cohort of women with early-stage breast cancer found that the largest increases in p16 levels were associated with anthracycline-based chemotherapy (Figure 4) as opposed to non-anthracycline chemotherapy (Muss et al., manuscript under review).
In a study of 42 patients age 70 and older with stage IV non-small cell lung cancer treated with nanoparticle albumin-bound-paclitaxel after previous treatment with a platinum doublet regimen, p16 was assessed at baseline and during treatment in 17 patients (79). As expected, baseline p16 in these heavily treated patients was higher than in age-matched normal controls but and there was no convincing change of p16 during chemotherapy treatment suggesting that, unlike anthracyclines and alkylating agents, taxanes may have minimal effects on T-cell aging.
Discussion
Clinical decision-making for cancer patients is complicated by patient age, comorbidities, perceived treatment tolerance, and life expectancy. Thus, an area of intense investigation is the development of accurate, simple, clinically applicable biomarkers of molecular age that characterize not only a patient’s ability to tolerate and benefit from therapy in the short-term but also reflect the age-accelerating effects of treatment that may lead to premature health decline and frailty. While efficacy will always be the predominant driver of treatment decisions in oncology, an accurate measure of toxicity risk becomes critical when: (I) there are multiple treatment options with similar efficacy but different toxicities, (II) when treatment benefit could be considered marginal relative to toxicity risk, and (III) when preventive measures are selectively applied to at-risk patients. Such scenarios, which are common in cancer treatment, require the oncologist and patient to make treatment decisions that could be much better informed with a clinically-validated biomarker of molecular age.
Measurement of molecular aging using p16 has great promise to provide robust information on outcomes and risk of toxicities associated with current cancer treatments. We believe that baseline p16 measurements will be confirmed by further research to predict the risks of treatment-related toxicity, chronic disease, and life-expectancy in cancer patients. Data from several clinical settings support the idea that measurement of p16 may be used to grade the aging effect of various chemotherapy regimens. Studies are currently in progress evaluating p16 as an independent predictor of regimen-specific chemotherapy-induced toxicities. In other areas of medicine, p16 expression is the focus of intensive research as a predictor of the success of solid organ transplant (80), chronic disease, and organ injury. Collectively, this work suggests that the knowledge of a patient’s molecular age and its clinical implications prior to a treatment or procedure has the potential to improve treatment decisions and allows clinicians to employ targeted interventions to minimize a patient’s risk and thereby improve outcomes.
Acknowledgments
Funding: We thank
Footnote
Provenance and peer review: This article was commissioned by the Guest Editor (Nathan A. Berger) for the series “Energy Balance, Aging, Obesity, and Cancer” published in Translational Cancer Research. The article has undergone external peer review.
Conflicts of Interest: All authors have completed the ICMJE uniform disclosure form (available at http://dx.doi.org/10.21037/tcr.2020.03.39). The series “Energy Balance, Aging, Obesity, and Cancer” was commissioned by the editorial office without any funding or sponsorship. The authors have no other conflicts of interest to declare.
Ethical Statement: The authors are accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved.
Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.
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