MiR-155-5p regulates autophagy and apoptosis of glioma cells through RICTOR
Original Article

MiR-155-5p regulates autophagy and apoptosis of glioma cells through RICTOR

Zhao Guo1#, Jing-Jie Tian1#, Yao Wang1, Lei Jiang1, Yang Chen1, He-Jun Dai2, Lei Wang3, Yi Zhang1,4,5

1Department of Neurosurgery, The Second Affiliated Hospital of Nantong University, Nantong, China; 2Department of Neurosurgery, Danyang Hospital Affiliated to Nantong University, Zhenjiang, China; 3Department of Emergency Center, The Second Affiliated Hospital of Nantong University, Nantong, China; 4State Key Laboratory of Systems Medicine for Cancer, Shanghai Cancer Institute, Shanghai, China; 5Department of Neurosurgery, Renji Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China.

Contributions: (I) Conception and design: Z Guo; (II) Administrative support: HJ Dai, Y Zhang; (III) Provision of study materials or patients: Y Zhang, L Wang, Y Chen; (IV) Collection and assembly of data: JJ Tian, L Jiang; (V) Data analysis and interpretation: Z Guo, JJ Tian; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors.

#These authors contributed equally to this work.

Correspondence to: Yi Zhang, MD. Department of Neurosurgery, The Second Affiliated Hospital of Nantong University, 666 Shengli Road, Chongchuan District, Nantong 226006, China; State Key Laboratory of Systems Medicine for Cancer, Shanghai Cancer Institute, Shanghai 200025, China; Department of Neurosurgery, Renji Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. Email: zhangyi9285@sina.com; Lei Wang, MM. Department of Emergency Center, The Second Affiliated Hospital of Nantong University, 666 Shengli Road, Chongchuan District, Nantong 226001, China. Email: wangleilei2339@163.com; Yang Chen, MM. Department of Neurosurgery, The Second Affiliated Hospital of Nantong University, 666 Shengli Road, Chongchuan District, Nantong 226001, China. Email: 3344165725@qq.com.

Background: Glioma characterized by the high degree of drug resistance and the poor prognosis is the most common primary malignant tumors of the brain. And miRNA is involved in a variety of biological behaviors of tumors, enhancing or inhibiting the occurrence and development of tumors. Therefore, the present study aims to explore whether miR-155-5p can regulate autophagy and apoptosis of glioma through RICTOR.

Methods: The significantly differential gene miR-155-5p was identified from the Gene Expression Omnibus (GEO; http://www.ncbi.nlm.nih.gov/geo) databases GSE165937 and GSE138764 using bioinformatics analysis, and its expression was validated by quantitative real-time polymerase chain reaction (qRT-PCR). The putative target genes of miR-155-5p were predicted through interrogation of relevant databases, followed by identification of key target genes. Subsequently, core target genes were selected for functional enrichment analysis. The U87MG cell line was utilized as the experimental model and divided into Negative Control1 (NC1) group, Mimic group, Negative Control2 (NC2) group, Inhibitor group, and NC + 3-methyladenine (3-MA) group. The expression levels of miR-155-5p, RICTOR, P62, LC-3, Bax, Bcl-2, and Caspase-3 were assessed using qRT-PCR, cellular fluorescence imaging, and Western blotting; while apoptosis in the U87MG cell line was evaluated via flow cytometry.

Results: The results showed that miR-155-5P was highly expressed in glioma cells, which could inhibit the expression of Bax, Caspase-3, LCII/LCI and Beclin1, and increase the expression of Bcl2 and P62. Flow cytometry and cell fluorescence were used to verify the above results. Moreover, when U87MG cells treated with miR-155-5p inhibitor were inhibited by 3-MA, the results showed that miR-155-5p enhanced the anti-apoptotic ability of U87MG cells by regulating autophagy. In addition, the bioinformatics results show that miR-155-5p survival prognosis in glioma into a strong negative correlation, while the survival prognosis of RICTOR in glioma showed a strong positive correlation. The core target genes Kyoto Encyclopedia of Genes and Genomes (KEGG) mainly occurred in PI3K-AKT signaling pathway; in addition, qRT-PCR and Western blot confirmed the regulatory effect of miR-155-5P on RICTOR.

Conclusions: MiR-155-5p regulates autophagy and apoptosis-related proteins in glioma cells through RICTOR, affecting the occurrence and development of glioma.

Keywords: MiR-155-5p; glioma cells; RICTOR; autophagy; apoptosis


Submitted Apr 01, 2024. Accepted for publication Aug 16, 2024. Published online Oct 18, 2024.

doi: 10.21037/tcr-24-543


Highlight box

Key findings

• We investigated the relationship which miR-155-5p regulates autophagy and apoptosis of glioma cells by regulating RICTOR, and explored the possible mechanism of the action, which is beneficial to the provision of new therapeutic insights for glioblastoma (GBM).

What is known and what is new?

• By far, relevant research has shown that miR-155-5P plays a biological role in the proliferation, invasion, temozolomide resistance, and mesenchymal transition of gliomas.

• This study aimed to identify the relationship which miR-155-5p regulates autophagy and apoptosis of glioma cells by regulating RICTOR, exploring the possible mechanism in GBM.

What is the implication, and what should change now?

• Experiments in vitro and bioinformatics analysis were conducted. U87 cells were used for in vitro, including quantitative real-time polymerase chain reaction, western blotting, immune fluorescence, and flow cytometry. Bioinformatics analysis included obtaining relevant data by accessing Gene Expression Omnibus (GEO), Chinese Glioma Genome Atlas (CGGA), and The Cancer genome Atlas program (TCGA).

• Database for Annotation, Visualization and Integrated Discovery (DAVID), Gene Expression Profiling Interactive Analysis (GEPIA2), Encyclopedia of RNA Interactomes (ENCORI), Protein-protein Interaction Networks Functional Enrichment Analysis (STRING) databases, and analyzing and processing the data using software such as Rstudio, Draw Veen Diagram, and Cytoscape.


Introduction

Glioma is one of the most common primary malignant tumors of the brain, accounting for about 10.9% of the tumors (1). At present, the etiology of glioma is still unknown, mainly involving exposure to high-dose ionizing radiation, high penetrance genetic mutations, nitrite food, virus or bacterial infection and other factors. It is mainly classified into four types: ependymoma, astrocytoma, oligodendroglioma and mixed glioma. It has the characteristics of strong invasiveness, high malignancy and easy recurrence (2,3). At the same time, the conventional treatment of glioma mainly includes surgical treatment, postoperative radiotherapy and chemotherapy. However, due to the high degree of drug resistance of glioma, the prognosis of patients is poor. The median survival time is 15 months, and the 5-year average survival rate is only about 5% (4). Therefore, it is urgent to seek new therapeutic targets to enhance the therapeutic effect on postoperative recurrence, drug resistance and metastasis of glioma patients and prolong the survival prognosis of patients. MicroRNA (miRNA) plays a key role in the occurrence and development of glioma. Many studies have shown that miRNA is involved in a variety of biological behaviors of tumors, enhancing or inhibiting the occurrence and development of tumors (5-7).

MiRNAs are short non-coding RNAs with a length of 18–22 nucleotides (8). MiRNAs cause the degradation of target mRNAs by complete or partial complementary binding to target mRNAs or down-regulating the expression level of target proteins by inhibiting their transcription, and promoting the expression of related oncogenes or tumor suppressor genes (9), thus participating in the proliferation, invasion, metastasis, angiogenesis, mesenchymal epithelial transformation, drug resistance and other processes of tumor cells (10). A large number of studies have shown that miRNAs play an important role in various biological processes of tumors (11). MicroRNA-155 is located on chromosome 21q21.3, 1,421 bp in length, and its pre-miR-155 is cleaved into mature miR-155-5p (12,13). Studies have shown that miR-155-5p is involved in neuroinflammation (14), autoimmunity (15), atherosclerosis (16), Alzheimer’s disease (17), multiple sclerosis (18), breast cancer, oral cancer, leukemia, melanoma, cervical cancer, non-small cell lung cancer, tumor resistance and other pathophysiological processes (19,20). Furthermore, it plays an important role in the process of glioma metastasis, invasion, proliferation, methylation, mesenchymal transition and drug resistance (21-25). However, it is still unclear whether miR-155-5p regulates autophagy and apoptosis in glioma.

The mechanistic target of rapamycin complex 2 (mTORC2) primarily composed of mTOR kinase, RICTOR, MAPKAP1 (or mSIN1), and MLST88 has been identified as a key signaling molecule in autophagy (26). Relevant studies have shown that silencing RICTOR as the key protein in mTORC2 complex can affect the aging and differentiation of fibroblasts by regulating autophagy (27-29). Second, in traumatic optic nerve injury, mTORC2 activates autophagy to protect the retinal ganglion (30). In addition, recent studies have shown that miR-155 aggravated pancreatic acinar cell damage by targeting RICTOR (31). The pro-osteoarthritic effect of 2,2',4,4',5,5'-hexachlorobiphenyl (PCB153) could inhibit autophagy by up-regulating miR-155 and inhibiting RICTOR/AKT/mTOR in rat primary chondrocytes (32). The latest study shows that RICTOR amplification in targeted therapy, drug resistance, and glioma autophagy plays an important role (33,34), but the specific mechanism is still unclear.

Autophagy is a self-digestive intracellular catabolic process that plays a crucial role in cell homeostasis under starvation, oxidative stress, and genotoxic stress conditions (35). Its main mechanism involves PI3K/AKT, MEK/ERK1/2, energy metabolism and other signaling pathways and related biological processes (36). Autophagy has two sides in the occurrence and development of glioma, and the related targets and mechanisms are still unclear. Related studies have shown that under hypoxic conditions, miR-155 expression is increased to target multiple autophagy-related genes to enhance autophagy flux (37), while miR-155-5p inhibits PDK1 and promotes autophagy through mTOR in cervical cancer (38), but whether it regulates autophagy in gliomas remains unclear.

Therefore, we present this article that expression difference of miR-155-5p between U87 glioma cells and normal cells, and verified that miR-155-5p is involved in autophagy and apoptosis of glioma cells, and further explored that miR-155-5p regulates autophagy and apoptosis of glioma cells by regulating the expression of RICTOR protein. Our results will help to understand the regulation of miR-155-5p/RICTOR axis in glioma and provide new insights for the treatment of glioma. We present this article in accordance with the MDAR reporting checklist (available at https://tcr.amegroups.com/article/view/10.21037/tcr-24-543/rc).


Methods

Cell culture

Human glioma U87MG, U251 and HA1800 (Human Astrocytes; NHA) were purchased from Yimo Biotechnology Co., Ltd. (Xiamen, China). The more malignant U87MG cell line was selected for further experiment. These cells were cultured in summate basal medium (DMEM) medium containing 10% fetal bovine serum in a humidified incubator at 37 ℃ and 5% CO2, and the medium was changed every 2–3 days or during cell passage until cell confluence reached 70% to 90%.

Cell transfection and drug treatment

MiR-155-5p mimic negative control (NC)/mimic/inhibitor NC/inhibitor was purchased from Nantong Sowing Biotechnology Co., Ltd., riboFECTTM CP Transfection Kit Transfection reagent (Catalog No C10511-05, RiboBio, Suzhou, China), 3-MA (Catalog No. HY-19312, MedChemExpress, Shanghai, China), U87MG cells in good condition were digested, centrifuged, resuspended, evenly spread into 6-well plates to reach 30%, and left overnight. According to the plasmid transfection instructions of Ribobio Corporation, miR-155-5p mimic and inhibitor were mixed with transfection reagent and placed at room temperature for 15 minutes, then added to the complete medium. qPCR was used to detect the knockdown overexpression effect at 48 hours, and the protein level was detected at 72 hours. The pretransfected cells were treated with 3-MA (1 mM/L) for 24 hours and then harvested for protein extraction.

Western blot analysis

The glioma cells of each group were collected and washed with phosphate buffered saline (PBS) for 2–3 times, and then the cells were lysed on ice for 5 minutes. The cells were scraped and rotated in a refrigerator at 4 ℃ for 45 minutes, and then placed in a centrifuge at 15,000 rmp for about 20 minutes. After sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE), membrane was transferred with 20% methanol, blocked with 5% milk at room temperature for 2 hours, washed 3 times with Tris-buffered saline with Tween-20 (TBST), and added P62 (catalog number: 18420-1-AP, Proteintech Group, Wuhan, China), LC-3 (catalog number: 14600-1-AP, Proteintech Group, Wuhan, China), Bax (50599-2-Ig, Proteintech Group, Wuhan, China), Bcl-2 (catalog number: 68103-1-Ig, Proteintech Group, Wuhan, China), Caspase-3 (catalog number: 19677-1-AP, Proteintech Group, Wuhan, China) primary antibody dilution (diluted concentration: 1: 800) overnight at 4 ℃, and the cells were washed 3 times with TBST for 10 minutes each time. The secondary antibody dilution (dilution concentration 1:500) was added and incubated at room temperature for 2 hours. The membrane was washed by TBST, and the protein expression level was analyzed by visualization.

Quantitative real-time polymerase chain reaction (qRT-PCR)

In this experiment, the mRNA levels of miR-155-5p and RICTOR in each group were analyzed by qRT-PCR. The miR-155-5p primers were purchased from Suzhou Gemma Company, and other primer sequences are shown in Table 1. Total RNA was extracted from samples in each group (n=3 each) using total RNA extract (catalog number: R1100, Solarbio, Beijing, China). The amount of total RNA was determined using a Thermo NanoDrop one (Thermo Fisher, Waltham, MA, USA). Reverse transcription of complementary DNA (cDNA) was achieved using PrimeScriptTM RT Master Mix (catalog number: RR036A-1, TakaraBio, Kusatsu, Shiga, Japan). The qRT-PCR was then performed using BeyoFastTM SYBR Green qPCR Mix (2×, Low ROX) master mixture (catalog number: D7262, Beyotime, Shanghai, China) in a qRT-RCR instrument 7500 (Thermo Fisher, USA). Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) was used as an internal control to normalize the data.

Table 1

Primer sequence

Name Sequence
RICTOR F: CTGGATCTGACCCGAGAACC
R: TTGATACTCCCTGCAATCTGGC
EEF2 F: ACCTTGTGGAGATCCAGTGTC
R: CCCCGCTTCCTGTTCAAAAC
RAP1B F: GTGACAGCGTGAGAGGTACT
R: GACTTTCCAACGCCTCCTGA
PKN2 F: GTCCATACCGGAGCGCAA
R: CGGGAATCCCCCTGCAGT
TCF4 F: ACAGAAAGGGGCTCATACTCA
R: AGGAGACTCTGCTGGTGG
KRAS F: ACACAAAACAGGCTCAGGACT
R: AGCATCCTCCACTCTCTGTCT
CARD11 F: TTGAGAGGAACACGAGGAAC
R: ATCTGGACTTGCAGTGCTTG
CBL F: GGAACTGCTTCTAAGGCTGC
R: GAAGTGTGGGAGGTACTGGC
BDNF F: GGCGGTACCCCCAGTTCC
R: CTTTCATGGGGGCAGCCTTC

F, forward primer; R, reverse primer.

Cytofluorometry

After the stimulation, the 24-well plates were placed on ice, washed 3 times, fixed with 4% polylysine at 20 ℃ for 20 minutes, washed 3 times with PBS, and blocked at room temperature for 2 hours. Diluted antibody LC-3 (1:200) was added overnight at 4 ℃ and washed 3 times with PBS. Fluorescent secondary antibody (diluted concentration 1:1,000) was added and incubated at room temperature for 2 hours in the dark, and washed 3 times with PBS. Then, DAPI was added (diluted concentration 1:2,000) and incubated at room temperature in the dark for 20 minutes, and washed 3 times with PBS for 5 minutes each time. Then, the small discs were picked out and placed on the blocking solution, and the slides were made.

Biological information analysis

RNA-sequencing data were extracted by visiting the Gene Expression Omnibus (GEO) biological database, and the data were imported into the Database for Annotation, Visualization and Integrated Discovery (DAVIA; https://davidbioinformatics.nih.gov) database to obtain the functional enrichment analysis of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) of related genes. The visualize functional enrichment analysis was plotted by https://www.bioinformatics.com.cn (last accessed on 20 May 2024), an online platform for data analysis and visualization. The survival prognosis curve of related genes was obtained by visiting The Cancer Genome Atlas (TCGA; https://portal.gdc.cancer.gov), Gene Expression Profiling Interactive Analysis (GEPIA2; http://gepia2.cancer-pku.cn) and Chinese Glioma Genome Atlas (CGGA; http://www.cgga.org.cn) databases. The target genes were predicted and intersected by TargetScan 8.0, MIRBD and Mirtarbase target gene websites. Then, the Draw Veen Diagram website was used to intersect the significantly different genes, and the Protein-protein Interaction Networks Functional Enrichment Analysis (STRING; https://cn.string-db.org) protein interaction website was used to obtain the protein interaction network diagram. The protein interaction data were imported into Cytoscape to screen the key genes and carry out experimental verification. The study was conducted in accordance with the Declaration of Helsinki (as revised in 2013).

Statistical analysis

All data were presented as mean ± standard deviation. The t-test was used for pairwise comparison, and one-way analysis of variance (ANOVA) was used for comparison among multiple groups. Images were processed using ImageJ and analyzed using GraphPad Prism version 9 software; P<0.05 was considered statistically significant.


Results

The expression of miR-155-5p was increased in glioma cells

In order to explore the biological role of miR-155-5p in glioma, we visited two data sets of GEO database GSE165937 and GSE138764, and utilized the limma package to identify genes with differential expression linked to miR-155-5p expression, applying a threshold of |log2 fold change| ≥2 and an adjusted P value of <0.05 (Figure 1A). The intersection of GSE165937 and GSE138764 was taken through the online Wayne map website, and it was found that miR-155-5p was significantly highly expressed in glioma. Subsequently, we obtained the box diagram of the expression of miR-155-5p in gliomas with different degrees of malignancy in the CCGA database (Figure 1B). Then by visiting the TCGA database and the CGGA database, it was found that the expression of miR-155-5p was negatively correlated with survival prognosis (Figure 1C). Then we used qRT-PCR to detect the expression of miR-155-5p in U87, U251 glioma cell lines and NHA. It was found that the expression of miR-155-5p in U87 and U251 was significantly higher than that in NHA, while there was no significant difference between U87 and U251 (Figure 1D). Then, in order to further explore its related mechanism, we used Target Scan 8.0, MIRBD, miRTarBase target gene prediction software to predict the related target genes of miR-155-5p and take their intersection (Figure 1E). The key target genes were screened by STRING protein interaction website and different algorithms in Cytoscape software, including RAP1B, CBL, BDNF, EEF2, SMAD2, KRAS, PKN2, RICTOR, FGF7, and YWHAZ (Figure 1F).

Figure 1 The expression of miR-155-5p and its experimental verification in U87, U251 and NHA cells, as well as the prediction of related target genes. (A) Volcano maps of two datasets of GEO database GSE165937 and GSE138764. (B) CGGA database found the expression of miR-155 and glioma malignant classification. (C) The survival and prognosis analysis of miR-155-5p in TCGA database and CGGA were mutually corroborated. (D) The expression of miR-155-5p in U87, U251 glioma cell lines and NHA. (E) TargetScan 8.0, MIRBD and Mirtarbase target gene prediction software were used to predict the target genes of miR-155-5p. (F) STRING protein interaction website and Cytoscape software were used to screen out key target genes. **, P<0.01. ANOVA, analysis of variance; GEO, Gene Expression Omnibus; CGGA, Chinese Glioma Genome Atlas; TCGA, The Cancer Genome Atlas; NHA, HA1800 (human astrocytes).

GO and KEGG analysis of miR-155-5p target genes

The key target genes were screened by different algorithms in Cytoscape software and the key target genes were imported into the DAVID database to obtain the GO and KEGG enrichment analysis results of the key genes, and then the relevant results were imported into the online visualization website: https://www.bioinformatics.com.cn, to obtain the functional enrichment map of the key target genes (Figure 2). Figure 2A shows that biological processes are mainly enriched in signal transduction, protein phosphorylation, positive regulation of gene expression, negative regulation of apoptotic process, lung development and other biological processes; Figure 2B shows that the cell components are mainly enriched in cytosol, cytoplasm, focal adhesion, perinuclear region of cytoplasm, and Golgi apparatus; Figure 2C shows that molecular functions are mainly enriched in protein binding, cadherin binding, GTPase activity, GTP binding, protein kinase binding and other molecular functions; Figure 2D shows that the key target genes are mainly enriched in PI3K-Akt, Ras, MAPK, cancer, neurotrophin and other related signaling pathways. The PI3K-Akt, Ras, and MAPK-related signaling pathways play a key role in the autophagy process of glioma cells (39-42). Therefore, we further verified that miR-155-5p regulates the autophagy biological process of glioma by regulating related target genes.

Figure 2 Functional enrichment and pathway enrichment analysis of miR-155-5p target genes. (A-C) Visualization of biological processes, cellular components and molecular function enrichment analysis, respectively; (D) visual target gene KEGG enrichment analysis. KEGG, Kyoto Encyclopedia of Genes and Genomes.

MiR-155-5p regulates RICTOR and inhibits its expression in glioma

By accessing the Encyclopedia of RNA Interactomes (ENCORI) database, we obtained the correlation analysis between miR-155-5p and EEF2, RAP1B, PKN2, TCF4, KRAS, RICTOR, CARD11, CBL, BDNF genes in glioma, and found that miR-155-5p was significantly negatively correlated with the expression of RICTOR (Figure 3A). Subsequently, qRT-PCR verification showed that RICTOR could be significantly inhibited after overexpression of miR-155-5p (Figure 3B). Subsequently, we knocked down miR-155-5p and found that RICTOR expression increased. Finally, we further verified its regulatory relationship by Western blotting. It was found that knockdown of miR-155-5p could up-regulate the protein expression of RICTOR, and overexpression of miR-155-5p could inhibit the expression of RICTOR protein, which was consistent with the results of qPCR. The target location information of miR-155-5p and RICTOR gene and the survival prognosis curve of RICTOR were obtained by visiting TargetScan 8.0 and GEPIA2 database (Figure 3C).

Figure 3 Screening and experimental verification of related target genes of miR-155-5p. (A) Correlation analysis between miR-155-5p and key target genes in ENCORI database. (B) Quantitative real-time polymerase chain reaction was used to verify the expression of related target genes after knockdown of miR-155-5p. (C) The target position between miR-155-5p and RICTOR in the TargetScan 8.0 database. The survival prognosis map of RICTOR was obtained in the GEPIA2 database. Western blotting was used to detect the protein expression of RICTOR after knockdown and overexpression of miR-155-5p. *, P<0.05; **, P<0.01; ***, P<0.001; ****, P<0.0001. ns, no significance; ENCORI, Encyclopedia of RNA Interactomes; GEPIA2, Gene Expression Profiling Interactive Analysis; LGG, low-grade glioma; FPKM, fragments per kilobase of exon per million mapped reads; RPM, reads per million; NC, negative control; UTR, untranslated region; HR, hazard ratio.

Effects of miR-155-5p on autophagy and apoptosis in glioma cells U87

Subsequently, to explore the effects of miR-155-5p on autophagy and apoptosis in glioma cells, we detected the effects of miR-155-5p knockdown and overexpression on the expression of autophagy and apoptosis-related proteins in U87 cells (Figure 4A). The results of Figure 4 showed that overexpression of miR-155-5p could reduce the expression of Bax protein in U87 glioma cells (Figure 4B), and increase the expression of Bcl-2 protein (Figure 4E). However, knockdown could increase the expression of Bax, LC3II/LC3I ratio, Beclin-1, P62, and Caspase-3 (Figure 4B-4D,4F,4G), while the expression of Bcl-2 protein decreased (Figure 4E). The results of apoptotic cells detected by flow cytometry suggested that inhibition of miR-155-5p expression increased the apoptosis of U87 cells (Figure 4H,4I). Therefore, we preliminarily concluded that knockdown of miR-155-5p could promote autophagy and apoptosis in U87 glioma, and cell fluorescence also confirmed that knockdown of miR-155-5p could enhance autophagy-related flux (Figure 4J,4K).

Figure 4 Effect of miR-155-5p on autophagy and apoptosis in glioma cell U87. (A) Western blot was used to detect the expression of autophagy and apoptosis-related proteins in U87 cells after overexpression or low expression of miR-155-5p; (B-G) statistical analysis of related protein molecules in Western blot experiments; (H) flow cytometry of U87 cell apoptosis after overexpression or low expression of miR-155-5p; (I) statistical bar graph of U87 cell apoptosis detected by flow cytometry; (J) LC3 expression was detected by immunofluorescence staining (20×); (K) statistical analysis of the mean fluorescence intensity of LC3. *, P<0.05; **, P<0.01; ***, P<0.001; ****, P<0.0001. ns, no significance; NC, negative control; PE, phycoerythrin; FITC, fluorescein isothiocyanate.

Correlation between autophagy and apoptosis in glioma cells

Then, to clarify the correlation between autophagy and apoptosis in glioma, miR-155-5p knockdown was followed by the addition of autophagy inhibitor 3-MA (1 mM). Western blot experiments showed that knockdown of miR-155-5p combined with autophagy inhibitor could further increase the expression of apoptosis-related proteins in glioma cells (Figure 5A-5G) and inhibit the progression of glioma. And, the efficacy of 3-MA was briefly verified by immunofluorescence single staining of LC3 (Figure 5H,5I). The cell fluorescence results verified that the autophagy inhibitor significantly inhibited the expression of autophagy-related protein LC3 (Figure 5H,5I).

Figure 5 Correlation between autophagy and apoptosis in glioma cells. (A) Western blot was used to detect the expression of autophagy and apoptosis-related proteins in U87 cells with low miR-155-5p expression or after adding autophagy inhibitor; (B-G) statistical analysis of related protein molecules in Western blot experiments; (H) LC3 expression was detected by immunofluorescence staining (20×) in cells with low miR-155-5p expression or with autophagy inhibitor; (I) statistical analysis of LC3 fluorescence intensity. *, P<0.05; **, P<0.01; ***, P<0.001; ****, P<0.0001. ns, no significance; NC, negative control; 3-MA, 3-methyladenine.

Discussion

Autophagy and apoptosis of tumor cells are closely related to the occurrence and development of tumors. MiRNAs can regulate many key cellular processes, such as proliferation, invasion, angiogenesis, apoptosis, stress response, differentiation and development. This provides a certain idea and direction for the treatment of tumors.

The present study has shown that glioma stem cells (GSCs-derived) exosomes exhibit higher miR-155-5p expression levels (22). Moreover, many studies have shown that miR155-5p promotes the progression of cancer in a variety of tumors, including liver cancer, squamous cell carcinoma and colon cancer (43,44). As recently reported, exosome miR-155-5p can promote CXCL12/CXCR7-induced colorectal cancer metastasis through cross-talk with cancer-associated fibroblasts (45). Reactive oxygen species reprogram macrophages through the exosome miR-155-5p/PD-L1 pathway to inhibit anti-tumor immune responses (46). In our study, we searched the CGGA database and found that miR-155 expression was negatively correlated with survival prognosis (Figure 1B). We then examined the expression of miR-155-5p in U87 and U251 glioma cell lines and NHA. It was found that the expression of miR-155-5p in U87 and U251 was significantly higher than that in normal brain tissues, while there was no significant difference between U87 and U251 (Figure 1D).

Glioma is a common primary malignant tumor of the central nervous system. With the development of science and technology, major breakthroughs have been made in the treatment of many tumors, but the prognosis of patients with aggressive glioma is still very poor. Therefore, further studies on glioma are urgently needed to improve the prognosis of glioma patients. A recent study reported that miR-155-5p enhanced glioma migration and invasion by directly targeting ACOT12 (22). In this work, the key target gene RICTOR was screened by String and Cytoscape software, and the targeted regulatory relationship was further verified by Western blot and qPCR. We found that knocking down miR-155-5p up-regulated the protein expression of RICTOR. Overexpression of miR-155-5p inhibited the expression of RICTOR protein. Further study showed that the low expression of miR-155-5p promoted the apoptosis of U87 cells, and the specific inhibition of miR-155-5p also increased the expression of autophagy-related proteins in U87 cells, thereby enhancing autophagy and homeostatic regulation (Figure 4). Subsequent study has shown that knockdown expression of miR-155-5p combined with autophagy inhibitors may further promote the apoptosis of glioma cell line U87, thereby enhancing the therapeutic effect of glioma (Figure 5).

This study has several limitations. An in vivo animal model was not established for further study. Due to the time and the source of patients, not enough human tumor specimens were obtained for further research and verification. The cell lines studied were relatively homogeneous.

Our results identify a novel miR-155-5p/RICTOR regulatory axis in glioma cells and provide new insights into the regulation of apoptosis and autophagy in glioma. We suggest that miR-155-5p may be a novel therapeutic target for glioma.


Conclusions

MiR-155-5p regulates autophagy and apoptosis-related proteins in glioma cells through RICTOR, affecting the occurrence and development of glioma.


Acknowledgments

Funding: This work was supported by State Key Laboratory of Oncogenes and Related Genes Research Project (KF2203-93), Medical Research Project of Jiangsu Provincial Health and Health Commission (Z2022067), The first phase of “Research and Innovation Team Project” of Kangda College of Nanjing Medical University (KD2022KYCXTD006), General Project of Clinical Basic Research, Nantong University (2022JY00 and 2023HY001), Scientific Research Foundation of Nantong Health Committee (MSZ2022013, MS2022014, and QN2023017) and Nantong Science and Technology Planning Project (MSZ2023156 and JC12022015).


Footnote

Reporting Checklist: The authors have completed the MDAR reporting checklist. Available at https://tcr.amegroups.com/article/view/10.21037/tcr-24-543/rc

Data Sharing Statement: Available at https://tcr.amegroups.com/article/view/10.21037/tcr-24-543/dss

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Conflicts of Interest: All authors have completed the ICMJE uniform disclosure form (available at https://tcr.amegroups.com/article/view/10.21037/tcr-24-543/coif). The authors have no conflicts of interest to declare.

Ethical Statement: The authors are accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved. The study was conducted in accordance with the Declaration of Helsinki (as revised in 2013).

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Cite this article as: Guo Z, Tian JJ, Wang Y, Jiang L, Chen Y, Dai HJ, Wang L, Zhang Y. MiR-155-5p regulates autophagy and apoptosis of glioma cells through RICTOR. Transl Cancer Res 2024;13(10):5509-5521. doi: 10.21037/tcr-24-543

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